PHATRDRAFT_49011 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49011	chr_20		299001	301223	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0251

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0193	0.36	17 33000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ank_5		Ankyrin repeats (many copies); Ankyrin repeats (many copies).	cl02529	40.8052	0.000116796	247 - 304	specific	258127
Ank_5 superfamily		Ankyrin repeats (many copies); Ankyrin repeats (many copies).	-	40.8052	0.000116796	247 - 304	superfamily	261327
BBP1_C superfamily		Spindle pole body component BBP1, C-terminal; This C-terminal domain of BBP1, a spindle pole body...	-	42.343	0.000128209	401 - 519	superfamily	259405

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21058		Not available	258969	323297	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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