PHATRDRAFT_49288 2og-feoxygenase family (2OG-FeII_Oxy_4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49288 chr_21 2og-feoxygenase family (2OG-FeII_Oxy_4) 476431 477678 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0176

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0140
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2OG-FeII_Oxy_4 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 66.7092 6.23E-14 172 - 243 specific 257968
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 41.6407 3.51E-05 351 - 395 superfamily 266616
2OG-FeII_Oxy_3 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... cl17304 41.6407 3.51E-05 351 - 395 specific 257950
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 41.6407 3.51E-05 351 - 395 superfamily 266616
2OG-FeII_Oxy_5 superfamily Putative 2OG-Fe(II) oxygenase; This family has structural similarity to the 2OG-Fe(II) oxygenase... - 35.6832 0.00348908 305 - 381 superfamily 266906

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1091 Not available 188012 328051 436611 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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