PHATRDRAFT_49494 zinc finger (c3hc4-type ring finger) family protein (RING)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49494	chr_22	zinc finger (c3hc4-type ring finger) family protein (RING)	412099	412806	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0106

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0034	0.35	0.0082 2500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RING		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	cl17238	47.0552	9.36E-08	183 - 228	specific	238093
RING superfamily		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	-	47.0552	9.36E-08	183 - 228	superfamily	266579

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32557		Not available	267659	296196	Not available	Not available	AT1G17970.1	484474

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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