PHATRDRAFT_49529 mgc82743 protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49529 chr_22 mgc82743 protein (WD40 superfamily) 529727 532267 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0303

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0009
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear... cl00062 68.9522 8.26E-14 110 - 197 specific 238017
FHA superfamily Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear... - 68.9522 8.26E-14 110 - 197 superfamily 260165
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 97.4056 3.13E-22 351 - 701 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 78.5919 2.05E-15 348 - 763 multi-dom 225201
COG1716 FOG: FHA domain [Signal transduction mechanisms] - 49.569 5.18E-07 114 - 197 multi-dom 224630

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23410 Not available 237847 196135 457885 Cre04.g217750.t1.1 AT2G20330.1 344261

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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