PHATRDRAFT_49720
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49720 chr_24 53656 57398 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0362

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0252
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 38.7106 0.000966566 672 - 715 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 37.5012 0.00259191 766 - 809 superfamily 266586
Myb_DNA-binding Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as... cl17250 37.5012 0.00259191 766 - 809 specific 249715
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 37.5012 0.00259191 766 - 809 superfamily 266586

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25480 Not available 246204 284468 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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