PHATRDRAFT_4974 transducin wd-40 repeat protein (WD40 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4974	chr_2	transducin wd-40 repeat protein (WD40 superfamily)	776444	777097	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0202

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WD40 superfamily		WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions...	-	78.916	6.55E-18	6 - 212	superfamily	238121
COG2319		FOG: WD40 repeat [General function prediction only]	-	69.3471	4.33E-14	1 - 216	multi-dom	225201

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263034		Not available	210495	166473	54282	Cre02.g113250.t1.1	AT2G34260.2	359158

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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