PHATRDRAFT_49808 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49808	chr_24		387101	392257	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0221

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0127	0.23	1.1 59

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	42.9478	4.81E-05	1162 - 1201	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	42.9478	4.81E-05	1162 - 1201	superfamily	266586
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	42.9478	4.81E-05	1162 - 1201	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	42.9478	4.81E-05	1162 - 1201	superfamily	266586

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262617		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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