PHATRDRAFT_49897 20s proteasome alpha subunit (proteasome_alpha_type_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49897	chr_25	20s proteasome alpha subunit (proteasome_alpha_type_2)	229454	230341	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
proteasome_alpha_type_2		proteasome_alpha_type_2. The 20S proteasome, multisubunit proteolytic complex, is the central...	cl00467	392.07	6.01E-139	6 - 233	specific	239719
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	392.07	6.01E-139	6 - 233	superfamily	260443
PRK03996		proteasome subunit alpha; Provisional	-	227.409	4.83E-74	5 - 235	multi-dom	235192

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30683		Not available	263180	228240	462164	Cre08.g373250.t1.2	AT1G16470.2	354471

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments