PHATRDRAFT_49987 and mbr-like protein (TspO_MBR)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49987	chr_26	and mbr-like protein (TspO_MBR)	42707	43561	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0121

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TspO_MBR		TspO/MBR family; Tryptophan-rich sensory protein (TspO) is an integral membrane protein that acts...	cl01379	98.7972	2.55E-25	153 - 281	specific	251713
TspO_MBR superfamily		TspO/MBR family; Tryptophan-rich sensory protein (TspO) is an integral membrane protein that acts...	-	98.7972	2.55E-25	153 - 281	superfamily	260907

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
2880		Not available	195390	169171	109281	Cre03.g175500.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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