PHATRDRAFT_50019 vacuolar transporter chaperone 4 (PolyPPase_VTC4_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50019 chr_26 vacuolar transporter chaperone 4 (PolyPPase_VTC4_like) 155609 158034 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0360

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0164
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PolyPPase_VTC4_like Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) protein VTC4,... cl11964 387.872 2.82E-129 207 - 486 specific 143623
CYTH-like_Pase superfamily CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) Phosphatases; CYTH-like... - 387.872 2.82E-129 207 - 486 superfamily 264489
VTC1 Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones] cl09954 105.922 1.62E-26 609 - 715 specific 227589
DUF202 superfamily Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which... - 105.922 1.62E-26 609 - 715 superfamily 263935
SPX superfamily SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue... - 94.4197 4.86E-22 1 - 171 superfamily 251734
SPX superfamily SPX domain; We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue... - 94.4197 4.86E-22 1 - 171 superfamily 251734
COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion... - 349.096 3.07E-111 1 - 489 multi-dom 227369

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
43150 Not available 237325 68375 438229 Cre09.g402775.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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