PHATRDRAFT_50546 (PPR_2)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50546	chr_31	(PPR_2)	76603	78910	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0497

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0040	0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PPR_2		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	cl03252	49.3234	1.36E-07	522 - 571	specific	257477
PPR_2 superfamily		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	-	40.849	9.04E-05	488 - 535	superfamily	261658
PPR_2 superfamily		PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found...	-	40.849	9.04E-05	488 - 535	superfamily	261658

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22114		Not available	252135	163896	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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