PHATRDRAFT_51026 histone deacetylase 1 (PTZ00063)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51026	chr_12	histone deacetylase 1 (PTZ00063)	195087	196553	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0143

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0126	0.29	160 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HDAC_classI		Class I histone deacetylases; Class I histone deacetylases (HDACs) are Zn-dependent enzymes that...	cl17011	633.466	0	10 - 315	specific	212517
Arginase_HDAC superfamily		Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily...	-	633.466	0	10 - 315	superfamily	266496
PTZ00063		histone deacetylase; Provisional	-	584.851	0	5 - 424	multi-dom	240251

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
41025		Not available	170265	202833	453147	Cre09.g387393.t1.1	AT4G38130.2	311727

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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