PHATRDRAFT_51430 glutamine-trna ligase (PLN03233)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51430 chr_1 glutamine-trna ligase (PLN03233) 1692202 1693852 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0233

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 370.814 5.56E-126 11 - 320 superfamily 260139
tRNA-synt_1c_C superfamily tRNA synthetases class I (E and Q), anti-codon binding domain; Other tRNA synthetase sub-families... - 122.756 9.53E-33 318 - 490 superfamily 252270
tRNA-synt_1c_C superfamily tRNA synthetases class I (E and Q), anti-codon binding domain; Other tRNA synthetase sub-families... - 122.756 9.53E-33 318 - 490 superfamily 252270
PLN03233 putative glutamate-tRNA ligase; Provisional - 1125.1 0 1 - 523 multi-dom 178772

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
42226 Not available 200963 215943 456477 Cre11.g467547.t1.1 AT5G26710.1 284659

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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