PHATRDRAFT_51700 ripening-associated protein (PRK02534)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_51700	chr_4	ripening-associated protein (PRK02534)	1098916	1100067	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0232	0.25	8.9 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GHMP_kinases_N superfamily		GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and...	-	45.2368	1.24E-06	147 - 202	superfamily	249743
GHMP_kinases_N superfamily		GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and...	-	45.2368	1.24E-06	147 - 202	superfamily	249743
PRK02534		4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	-	180.088	2.46E-53	59 - 345	multi-dom	235049

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31907		Not available	267640	320923	461009	Cre02.g145050.t1.2	AT2G26930.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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