PHATRDRAFT_51876 (rad50)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51876 chr_7 (rad50) 425431 430479 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0115

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_Rad50 ATP-binding cassette domain of Rad50; The catalytic domains of Rad50 are similar to the ATP-binding... cl17201 133.116 1.56E-34 1312 - 1394 specific 213207
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 51.8391 1.67E-07 4 - 190 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 51.8391 1.67E-07 4 - 190 superfamily 266551
rad50 rad50; All proteins in this family for which functions are known are involvedin recombination,... - 353.197 4.66E-101 2 - 1417 multi-dom 129694

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
9195 Not available 199319 Not available 450484 Cre03.g192550.t1.1 AT2G31970.1 293155

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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