PHATRDRAFT_52412 chloride channel 7 (Voltage_gated_ClC superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_52412 chr_17 chloride channel 7 (Voltage_gated_ClC superfamily) 552282 554474 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0077

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0239
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the... cl15354 83.0704 7.01E-19 614 - 667 specific 239964
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 83.0704 7.01E-19 614 - 667 superfamily 265675
Voltage_gated_ClC superfamily CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl-... - 439.781 3.63E-147 30 - 484 superfamily 261508
COG0517 FOG: CBS domain [General function prediction only] - 42.0733 5.40E-05 617 - 667 multi-dom 223591

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263848 Not available 203497 Not available Not available Not available AT5G49890.1 520430

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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