PHATRDRAFT_53964 testis secretory pathway calcium transporting atpase (ATPase-IIA2_Ca)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_53964 chr_1 testis secretory pathway calcium transporting atpase (ATPase-IIA2_Ca) 729829 733202 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0247

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0175
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 46.2091 4.18E-06 589 - 708 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 46.2091 4.18E-06 589 - 708 superfamily 119389
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 223.6 9.06E-67 120 - 355 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 223.6 9.06E-67 120 - 355 superfamily 249606
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 157.008 1.77E-43 773 - 945 superfamily 250058
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 157.008 1.77E-43 773 - 945 superfamily 250058
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 98.0696 7.11E-24 440 - 536 superfamily 257602
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 98.0696 7.11E-24 440 - 536 superfamily 257602
Cation_ATPase_N Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... cl02930 40.5995 0.000195326 42 - 108 specific 250059
Cation_ATPase_N superfamily Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 40.5995 0.000195326 42 - 108 superfamily 261517

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33766 Not available 177067 Not available Not available Not available Not available 247933

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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