PHATRDRAFT_54442 alpha-adr (alpha-adaptin) binding structural molecule (Adaptin_N)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54442 chr_7 alpha-adr (alpha-adaptin) binding structural molecule (Adaptin_N) 643979 647414 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0250

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Alpha_adaptin_C superfamily Alpha adaptin AP2, C-terminal domain; Alpha adaptin is a hetero tetramer which regulates clathrin-... - 90.4552 5.69E-21 888 - 1009 superfamily 251207
Alpha_adaptinC2 Adaptin C-terminal domain; Adaptins are components of the adaptor complexes which link clathrin to... cl03759 45.6971 5.24E-06 772 - 871 specific 197886
Alpha_adaptinC2 superfamily Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation... - 45.6971 5.24E-06 772 - 871 superfamily 261874
RNase_Ire1_like superfamily RNase domain (also known as the kinase extension nuclease domain) of Ire1 and RNase L; This RNase... - 35.909 0.00923246 578 - 687 superfamily 265676
Adaptin_N Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and... - 286.426 3.02E-85 53 - 642 multi-dom 250737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263997 Not available 258120 256733 70774 Cre12.g488850.t1.1 AT5G22770.2 321395

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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