PHATRDRAFT_54597 phenylalanyl-trna synthetase class iic familyexpressed (PLN02788)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54597 chr_10 phenylalanyl-trna synthetase class iic familyexpressed (PLN02788) 660303 661520 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0234

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain. PheRS belongs to class II... cl00268 270.956 6.12E-89 75 - 297 specific 238277
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 270.956 6.12E-89 75 - 297 superfamily 260313
FDX-ACB Ferredoxin-fold anticodon binding domain; This is the anticodon binding domain found in some... cl08386 116.756 6.29E-32 314 - 405 specific 214893
FDX-ACB superfamily Ferredoxin-fold anticodon binding domain; This is the anticodon binding domain found in some... - 116.756 6.29E-32 314 - 405 superfamily 263619
PLN02788 phenylalanine-tRNA synthetase - 718.083 0 3 - 405 multi-dom 215422

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24163 Not available 192847 310658 453508 Cre02.g079600.t1.2 AT3G58140.1 326460

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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