PHATRDRAFT_54926 (Carboxyl_trans)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54926 chr_18 (Carboxyl_trans) 291064 298130 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0135
Normalized Mean Residue
Phatr_bicluster_0010
0.55
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
biotinyl_domain The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-... cl11404 70.5227 3.49E-14 730 - 795 specific 133459
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 70.5227 3.49E-14 730 - 795 superfamily 264355
ATP-grasp_4 superfamily ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent... - 187.894 4.05E-53 214 - 446 superfamily 266590
Biotin_carb_C Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... cl08365 120.655 4.69E-31 484 - 590 specific 251532
Biotin_carb_C superfamily Biotin carboxylase C-terminal domain; Biotin carboxylase is a component of the acetyl-CoA... - 120.655 4.69E-31 484 - 590 superfamily 263607
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 112.962 1.99E-28 90 - 206 superfamily 249744
CPSase_L_chain superfamily Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase catalyses the... - 112.962 1.99E-28 90 - 206 superfamily 249744
Carboxyl_trans Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases.... - 522.189 7.48E-167 1472 - 2008 multi-dom 250315
AccC Biotin carboxylase [Lipid metabolism] - 397.793 3.71E-123 90 - 590 multi-dom 223516
ACC_central Acetyl-CoA carboxylase, central region; The region featured in this family is found in various... - 350.085 3.13E-103 856 - 1358 multi-dom 254731
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
12234 Not available 145710 318630 455280 Cre08.g373050.t1.1 AT1G36160.2 254604
KEGG description KEGG Pathway
Not available Not available
Not available -
Log in to post comments