PHATRDRAFT_55018 phosphoenolpyruvate carboxykinase (PEPCK_ATP)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_55018	chr_21	phosphoenolpyruvate carboxykinase (PEPCK_ATP)	387952	390004	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0327

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0018	0.38	0.000056 9.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PEPCK_ATP		Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first...	cl00270	814.151	0	95 - 609	specific	238270
PEPCK_HprK superfamily		Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first...	-	814.151	0	95 - 609	superfamily	260315

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5186		Not available	269498	283915	444355	Cre02.g141400.t1.2	AT4G37870.1	562373

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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