PHATRDRAFT_769 nuclear vcp-like protein (SpoVK)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_769 chr_14 nuclear vcp-like protein (SpoVK) 382519 384318 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0143

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0024
 0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 99.9131 1.65E-24 3 - 173 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 99.9131 1.65E-24 3 - 173 superfamily 267297
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 99.9131 1.65E-24 3 - 173 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 99.9131 1.65E-24 3 - 173 superfamily 267297
SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] - 478.164 8.16E-164 17 - 539 multi-dom 223540

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37748 Not available 137448 237625 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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