PHATRDRAFT_8185 protein component of the largeribosomalidentical to rpl42ap and has similarity to rat l44 required for propagation of the killer toxin-encoding m1 double-stranded rna satellite of the l-a double-stranded rna virus (PTZ00157)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_8185 chr_5 protein component of the largeribosomalidentical to rpl42ap and has similarity to rat l44 required... 978609 978908 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0146

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0228
 0.14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTZ00157 60S ribosomal protein L36a; Provisional cl00706 103.741 5.82E-30 1 - 85 specific 240296
Ribosomal_L44 superfamily Ribosomal protein L44; Ribosomal protein L44. - 103.741 5.82E-30 1 - 85 superfamily 260582

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
5259 Not available 204387 304708 Not available Cre06.g310700.t1.2 AT4G14320.1 289114

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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