PHATRDRAFT_9554 30s ribosomal protein s17 (rpsQ)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_9554	chr_1	30s ribosomal protein s17 (rpsQ)	1190762	1190998	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0030

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0090	0.41	0.000000000055 7600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
rpsQ		30S ribosomal protein S17; Reviewed	cl00351	78.2723	1.75E-20	1 - 72	specific	235532
Ribosomal_S17 superfamily		Ribosomal protein S17; Ribosomal protein S17.	-	78.2723	1.75E-20	1 - 72	superfamily	241807

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263665		Not available	145324	311156	Not available	Not available	AT3G18880.1	547007

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments