PHATRDRAFT_bd1493
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_bd1493 bd_35x35 734 1737 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... cl17169 41.1365 3.31E-05 21 - 98 specific 240668
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 41.1365 3.31E-05 21 - 98 superfamily 266524
RRM_SF RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... cl17169 41.1365 3.31E-05 21 - 98 specific 240668
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 41.1365 3.31E-05 21 - 98 superfamily 266524
ZnF_C3H1 zinc finger; zinc finger. cl11592 35.6829 0.00185506 160 - 183 specific 214632
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 35.6829 0.00185506 160 - 183 superfamily 264437
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 54.1826 1.28E-08 181 - 326 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24369 Not available 140214 255521 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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