11166 (Tp_CCHH12) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11166 chr_19a_19 (Tp_CCHH12) regulator [Rayko] 333084 334002 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7449917 Thaps11166.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0089

Most Highly Correlated Transcripts

38270

hypothetical protein
0.8952

36007

Aldolase_II superfamily
0.8864

7153

hypothetical protein
0.8842

37118

FeThRed_B
0.8831

19158

GRX_PICOT_like
0.8823

37564

DIM1
0.8817

268443

SAICAR_synt_Sc
0.8814

4150

(Tp_bZIP11) regulator [Rayko]
0.8784

4757

Leo1
0.8777

3180

hypothetical protein
0.8772

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50130 PHATRDRAFT_50130 269649 320780 211053 Cre07.g341650.t1.2 AT3G05760.2 Not available

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

GO:0003676 GO:0005634 GO:0008270 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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