11508 Prefoldin_betaThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11508	chr_20	Prefoldin_beta	307173	308233	+	Prefoldin_beta

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448522	Thaps11508.3, Thaps11508.1, Thaps11508.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0230

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0251	0.43	0.004 0.046

Most Highly Correlated Transcripts

36650 hypothetical protein 0.8902	bd1806 (bd1806) AAT_I superfamily 0.874	37374 PseudoU_synth superfamily 0.8558	20625 DUF4602 0.8478	4517 hypothetical protein 0.8381	38646 TRX_family 0.8323
269034 hypothetical protein 0.828	22840 hypothetical protein 0.8243	bd636 (bd636) L51_S25_CI-B8 0.8226	4372 hypothetical protein 0.8192

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Prefoldin_beta		Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two...	cl09111	91.2945	3.14E-23	135 - 241	specific	238345
Prefoldin superfamily		Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that...	-	91.2945	3.14E-23	135 - 241	superfamily	263721

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_24783	PHATRDRAFT_24783	267853	311423	Not available	Not available	AT1G29990.1	536504

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments