11667 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11667 chr_22 hypothetical protein 42753 44141 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7449467 Thaps11667.3, Thaps11667.2, Thaps11667.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0332

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0047
 0.45

Most Highly Correlated Transcripts

262004

CAP_ED
0.8557

262152

hypothetical protein
0.8432

2954

hypothetical protein
0.8339

596

Adaptin_N
0.8337

27435

PAH
0.8335

264072

(HSF43) HSF_DNA-bind superfamily
0.8327

22666

hypothetical protein
0.8324

31437

Peptidase_M16 superfamily
0.8311

2942

hypothetical protein
0.8311

263580

(Tp_CSF1) regulator [Rayko]
0.8309

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42514 PHATRDRAFT_42514 259693 235432 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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