1238 Glo_EDI_BRP_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
1238 chr_1 Glo_EDI_BRP_like 1019298 1019738 + Glo_EDI_BRP_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7445651 Thaps1238.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0007

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0261
 0.35

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9373

5957

hypothetical protein
0.9241

33829

Ycf34 superfamily
0.9072

20405

GRX_GRXh_1_2_like
0.8963

4876

hypothetical protein
0.8914

26991

GRX_GRXh_1_2_like
0.8913

3204

hypothetical protein
0.8906

35956

SIR2 superfamily
0.8842

3119

hypothetical protein
0.882

4829

hypothetical protein
0.8799

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including... cl14632 55.1166 8.00E-11 21 - 139 specific 211348
Glo_EDI_BRP_like superfamily This domain superfamily is found in a variety of structurally related metalloproteins, including... - 55.1166 8.00E-11 21 - 139 superfamily 265436

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38271 PHATRDRAFT_38271 200847 179490 Not available Not available AT1G64185.1 508215

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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