15539 CysS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15539 chr_18 CysS 380276 382387 + CysS

Synonyms

NCBI ID Ensembl Genomes exon ID
7444273 Thaps15539.2, Thaps15539.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0154

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0121
 0.36

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9389

bd446

(bd446) HrpA
0.8966

270251

(NTT4) hypothetical protein
0.8593

bd1949

(bd1949) NA
0.8583

6592

TroA-like superfamily
0.8533

23013

Trs65
0.8526

7975

eIF1_SUI1_like superfamily
0.8514

10050

DUF2233
0.8487

bd874

(bd874) NA
0.8477

4571

P4Hc
0.8443

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 304.263 3.14E-97 93 - 465 superfamily 260139
CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] - 370.405 2.03E-120 72 - 671 multi-dom 223293

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_2394 PHATRDRAFT_2394 202366 186067 Not available Not available Not available 564877

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004817 GO:0005524 GO:0006423 -

GO:0004817

cysteine-tRNA ligase activity

Details: 
Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006423

cysteinyl-tRNA aminoacylation

Details: 
The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO Category: 
BP

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