17854 HemeOThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
17854	chr_5	HemeO	172412	173431	-	HemeO

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps17854.1, Thaps17854.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0014

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0025	0.38	0.0000000018 0.000000059

Most Highly Correlated Transcripts

270343 hypothetical protein 1	2344 hypothetical protein 0.8671	3186 hypothetical protein 0.8581	26191 asnC 0.8552	926 hypothetical protein 0.8542	11086 hypothetical protein 0.8502
1599 hypothetical protein 0.8471	ThpsCp022 (psaE) photosystem I subunit IV 0.846	37288 PLN02487 0.8403	10943 (DXR1) PLN02696 0.8377

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HemeO		Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is...	cl17299	114.71	1.68E-30	82 - 287	specific	238143
HemeO superfamily		Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is...	-	114.71	1.68E-30	82 - 287	superfamily	266613

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_5851	PHATRDRAFT_5851	269243	124420	113033	Cre10.g423500.t1.2	AT2G26670.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004392 -

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