2081 RecA-like_NTPases superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
2081 chr_2 RecA-like_NTPases superfamily 117587 120702 - RecA-like_NTPases superfamily
NCBI ID Ensembl Genomes exon ID
7442184 Thaps2081.1, Thaps2081.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0311
Normalized Mean Residue
Thaps_bicluster_0209
0.34
(bd877) NA
0.8909
hypothetical protein
0.8624
(bd409) Snf7 superfamily
0.8593
(bd895) NA
0.825
(bd1877) NA
0.821
(bd815) NA
0.8106
(bd933) NA
0.8075
6PGL
0.8039
hypothetical protein
0.7834
(bd824) NA
0.7799
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RecA-like_NTPases superfamily RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and... - 93.8022 2.27E-21 346 - 621 superfamily 266574
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31781 PHATRDRAFT_31781 Not available 292867 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003684 GO:0005524 GO:0006281 GO:0006310 GO:0008094 -

damaged DNA binding

Details: 
Interacting selectively and non-covalently with damaged DNA.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

DNA recombination

Details: 
Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
GO Category: 
BP

DNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
GO Category: 
MF
Log in to post comments