22401 Lactamase_B
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22401 chr_4 Lactamase_B 1764652 1769422 - Lactamase_B

Synonyms

NCBI ID Ensembl Genomes exon ID
7451935 Thaps22401.1, Thaps22401.2, Thaps22401.4, Thaps22401.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0483

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0209
 0.34

Most Highly Correlated Transcripts

bd1890

(bd1890) NA
0.8408

20596

hypothetical protein
0.8231

20989

hypothetical protein
0.8054

23802

(Tp_HSF_2.7e) HSF_DNA-bind superfamily
0.7885

20982

Grp1_Fun34_YaaH superfamily
0.7805

264918

2A0303
0.7769

22018

(Tp_HSF_2.7h) HSF_DNA-bind superfamily
0.7759

22959

hypothetical protein
0.7716

22355

hypothetical protein
0.7711

25669

EEP superfamily
0.768

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lactamase_B Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily. cl00446 70.8301 4.68E-14 570 - 711 specific 250108
Lactamase_B superfamily Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily. - 70.8301 4.68E-14 570 - 711 superfamily 260426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44387 PHATRDRAFT_44387 201523 256296 431873 Not available Not available 515964

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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