22877 SapB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22877 chr_5 SapB 1889095 1890153 - SapB

Synonyms

NCBI ID Ensembl Genomes exon ID
7442259 Thaps22877.2, Thaps22877.3, Thaps22877.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0281
 0.33

Most Highly Correlated Transcripts

11184

hypothetical protein
0.9139

6757

hypothetical protein
0.9068

7597

2A0111
0.9064

5659

hypothetical protein
0.9059

8737

hypothetical protein
0.9033

6140

hypothetical protein
0.9025

5098

hypothetical protein
0.9023

11183

hypothetical protein
0.9015

10050

DUF2233
0.8956

264628

UxaC
0.8946

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MgtC superfamily MgtC family; The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The... - 92.4 2.51E-23 84 - 220 superfamily 111223
SapB Uncharacterized membrane protein [Function unknown] - 120.504 8.06E-33 84 - 216 multi-dom 224204

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_6387 PHATRDRAFT_6387 200880 118675 113726 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004867 GO:0016020 -

GO:0004867

serine-type endopeptidase inhibitor activity

Details: 
Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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