22984 gelsolin_S1_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22984 chr_6 gelsolin_S1_like 351885 353054 - gelsolin_S1_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7451141 Thaps22984.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0391

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

30701

PRK05279
0.955

2540

hypothetical protein
0.9139

24525

hypothetical protein
0.9113

262821

AAA
0.8893

4295

hypothetical protein
0.8893

4916

hypothetical protein
0.8841

6997

hypothetical protein
0.884

2130

BRF1 superfamily
0.8818

11490

hypothetical protein
0.8814

37497

cysE
0.8804

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
gelsolin_S1_like Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins;... cl15697 170.096 8.04E-52 32 - 154 specific 200446
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 77.2896 1.20E-17 283 - 364 superfamily 265764
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 77.2896 1.20E-17 283 - 364 superfamily 265764
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 77.2896 1.20E-17 283 - 364 superfamily 265764

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_19089 PHATRDRAFT_19089 271285 209419 41742 Cre12.g555550.t1.2 AT2G41740.1 349852

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003779 -

GO:0003779

actin binding

Details: 
Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO Category: 
MF

Add comment

Log in to post comments