23177 SF-assemblin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23177 chr_6 SF-assemblin 1278880 1279942 + SF-assemblin

Synonyms

NCBI ID Ensembl Genomes exon ID
7442406 Thaps23177.1, Thaps23177.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0454

Most Highly Correlated Transcripts

10898

hypothetical protein
0.9268

2540

hypothetical protein
0.9263

2855

hypothetical protein
0.9174

7936

ATP-synt_10 superfamily
0.912

33601

COG5133 superfamily
0.9044

23550

hypothetical protein
0.9035

23388

DUF106
0.9032

33075

RimI
0.9012

9115

DnaJ
0.901

4064

NADB_Rossmann superfamily
0.9005

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SF-assemblin SF-assemblin/beta giardin; This family consists of several eukaryotic SF-assemblin and related beta... - 80.9984 1.42E-18 34 - 265 multi-dom 115367

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50558 PHATRDRAFT_50558 272105 179883 Not available Not available Not available 558872

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005200 -

GO:0005200

structural constituent of cytoskeleton

Details: 
The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.
GO Category: 
MF

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