23226 XAP5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23226 chr_6 XAP5 1507220 1508421 + XAP5

Synonyms

NCBI ID Ensembl Genomes exon ID
7453315 Thaps23226.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0168

Most Highly Correlated Transcripts

5105

hypothetical protein
0.8845

1175

hypothetical protein
0.8821

36007

Aldolase_II superfamily
0.8818

35136

NA
0.8817

19826

LSm1
0.8815

1676

hypothetical protein
0.8814

4330

DUF2256
0.8762

25456

GH99_GH71_like_2
0.8746

10419

hypothetical protein
0.8707

30701

PRK05279
0.8686

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
XAP5 superfamily XAP5, circadian clock regulator; This protein is found in a wide range of eukaryotes. It is a... - 309.278 4.64E-104 149 - 372 superfamily 252877
XAP5 superfamily XAP5, circadian clock regulator; This protein is found in a wide range of eukaryotes. It is a... - 309.278 4.64E-104 149 - 372 superfamily 252877

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14084 PHATRDRAFT_14084 183417 194874 458904 Cre07.g341300.t1.2 AT2G21150.1 296182

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005634 -

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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