23272 AP_muniscins_like_MHD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23272 chr_6 AP_muniscins_like_MHD 1714358 1715675 - AP_muniscins_like_MHD

Synonyms

NCBI ID Ensembl Genomes exon ID
7442789 Thaps23272.2, Thaps23272.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0467

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0017
 0.42

Most Highly Correlated Transcripts

22748

ANK
0.8541

4599

hypothetical protein
0.833

23273

hypothetical protein
0.8329

25512

hypothetical protein
0.8244

bd1959

(bd1959) NA
0.8186

1706

hypothetical protein
0.8137

3617

SRPBCC superfamily
0.8128

19158

GRX_PICOT_like
0.8111

2731

hypothetical protein
0.8085

bd1884

(bd1884) AhpC-TSA_2
0.8056

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AP_muniscins_like_MHD Mu-homology domain (MHD) of muniscins adaptor proteins (AP) and similar proteins; This family... cl10970 247.715 3.73E-80 75 - 352 specific 211368
AP_MHD_Cterm superfamily C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); This... - 247.715 3.73E-80 75 - 352 superfamily 264154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43760 PHATRDRAFT_43760 214496 324368 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments