23650 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23650 chr_8 hypothetical protein 22298 27475 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7443426 Thaps23650.1, Thaps23650.4, Thaps23650.3, Thaps23650.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

40884

(RPA1) RNAP_I_RPA1_N
0.941

268735

(GPB1) WD40
0.924

40871

COG1444
0.9221

21222

SrmB
0.9188

21173

hypothetical protein
0.9183

34027

SrmB
0.9173

25139

RRN3 superfamily
0.9118

23900

hypothetical protein
0.9108

20985

COG5593
0.9089

25436

hypothetical protein
0.9086

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43865 PHATR_43865 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003684 GO:0005524 GO:0006298 -

GO:0003684

damaged DNA binding

Details: 
Interacting selectively and non-covalently with damaged DNA.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006298

mismatch repair

Details: 
A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO Category: 
BP

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