24015 Urb2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24015 chr_9 Urb2 superfamily 729622 734851 - Urb2 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448084 Thaps24015.1, Thaps24015.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0179
 0.28

Most Highly Correlated Transcripts

40884

(RPA1) RNAP_I_RPA1_N
0.9474

268130

hypothetical protein
0.9372

14890

Cupin_8 superfamily
0.9286

268252

Utp21 superfamily
0.9251

268735

(GPB1) WD40
0.9204

262091

eukaryotic translation initiation factor 3, subunit 10
0.9191

40529

COG2319
0.9182

20682

hypothetical protein
0.9177

25129

hypothetical protein
0.9165

25434

PRK00142
0.9158

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Urb2 superfamily Urb2/Npa2 family; This family includes the Urb2 protein from yeast that are involved in ribosome... - 73.1009 3.72E-14 1561 - 1701 superfamily 255991

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47371 PHATRDRAFT_47371 Not available 68346 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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