24068 SNARE component
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24068 chr_9 SNARE component 1028403 1029817 + SNARE component

Synonyms

NCBI ID Ensembl Genomes exon ID
7450991 Thaps24068.1, Thaps24068.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0426

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0107
 0.36

Most Highly Correlated Transcripts

264546

HA
0.8963

4898

hypothetical protein
0.8801

37118

FeThRed_B
0.8688

13448

Sec1
0.8687

37430

Sm_D2
0.8653

16114

PLN02350
0.8519

34293

(Tp_CCCH3) RRM_SF superfamily
0.8495

19158

GRX_PICOT_like
0.8491

36970

Fe-S_biosyn superfamily
0.849

12171

hypothetical protein
0.8471

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44364 PHATRDRAFT_44364 Not available 262337 76669 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
SNARE interactions in vesicular transport map04130

GO Terms

GO:0006886 GO:0016021 -

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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