24126 GINS_A_psf2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24126 chr_10 GINS_A_psf2 264641 265769 + GINS_A_psf2

Synonyms

NCBI ID Ensembl Genomes exon ID
7451060 Thaps24126.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0053

Most Highly Correlated Transcripts

24133

hypothetical protein
0.892

4898

hypothetical protein
0.8826

2571

hypothetical protein
0.8713

264347

NDUFA9_like_SDR_a
0.8707

28667

Cyto_heme_lyase superfamily
0.8704

13448

Sec1
0.8702

262363

hypothetical protein
0.8641

6630

hypothetical protein
0.864

37118

FeThRed_B
0.8616

2988

hypothetical protein
0.8596

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GINS_A_psf2 Alpha-helical domain of GINS complex protein Psf2 (partner of Sld5 2); Psf2 is a component of GINS... cl17012 96.1395 1.29E-24 76 - 214 specific 212550
GINS_A superfamily Alpha-helical domain of GINS complex proteins; Sld5, Psf1, Psf2 and Psf3; The GINS complex is... - 96.1395 1.29E-24 76 - 214 superfamily 266497

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40942 PHATRDRAFT_40942 238177 116440 Not available Cre01.g029100.t1.2 AT3G12530.1 328060

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005634 GO:0006260 -

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006260

DNA replication

Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO Category: 
BP

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