24184 ArfGap
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24184 chr_10 ArfGap 582014 584670 - ArfGap

Synonyms

NCBI ID Ensembl Genomes exon ID
7446850 Thaps24184.1, Thaps24184.2, Thaps24184.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0095

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0105
 0.42

Most Highly Correlated Transcripts

21308

RING
0.8885

bd392

(bd392) DEXDc
0.8815

6062

hypothetical protein
0.876

4445

hypothetical protein
0.8738

6288

hypothetical protein
0.8713

3842

hypothetical protein
0.8674

23013

Trs65
0.8671

1237

Seipin superfamily
0.8669

9024

hypothetical protein
0.8602

13909

EHD
0.8591

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArfGap Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... cl02464 117.722 1.00E-30 27 - 146 specific 250600
ArfGap superfamily Putative GTPase activating protein for Arf; Putative zinc fingers with GTPase activating proteins (... - 117.722 1.00E-30 27 - 146 superfamily 261296
COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated... - 70.9631 1.76E-13 29 - 349 multi-dom 227651

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42776 PHATRDRAFT_42776 180377 99043 69881 Cre06.g302900.t1.1 AT1G08680.3 258326

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0043087 -

GO:0043087

regulation of GTPase activity

Details: 
Any process that modulates the rate of GTP hydrolysis by a GTPase.
GO Category: 
BP

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