24725 SEC14Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24725	chr_13	SEC14	918090	919606	-	SEC14

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447889	Thaps24725.2, Thaps24725.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0180

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0054	0.44	0.00000000000079 0.044

Most Highly Correlated Transcripts

3229 hypothetical protein 0.9327	20688 (Tp_CBF/NF5) regulator [Rayko] 0.915	24034 hypothetical protein 0.9146	3098 MCT1_N 0.906	25189 hypothetical protein 0.9039	4192 hypothetical protein 0.903
26002 2Fe-2S_thioredx 0.8988	22673 NA 0.8983	9417 DUF1777 0.8952	21249 hypothetical protein 0.8948

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC14		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	cl15787	60.8618	1.33E-11	143 - 286	specific	238099
SEC14 superfamily		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	-	60.8618	1.33E-11	143 - 286	superfamily	265785

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45811	PHATRDRAFT_45811	184019	139928	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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