25738 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25738	chr_22	ANK	520395	523280	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442846	Thaps25738.4, Thaps25738.3, Thaps25738.5, Thaps25738.6, Thaps25738.1, Thaps25738.7, Thaps25738.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0126

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0060	0.47	0.0000000027 0.00038

Most Highly Correlated Transcripts

bd1935 (bd1935) NA 0.8603	261228 Robl_LC7 0.8524	8841 P4Hc 0.8503	2293 hypothetical protein 0.8491	263327 MFS_1 0.8486	25786 hypothetical protein 0.8464
11078 zf-C2HC5 0.8458	11098 GH99_GH71_like_2 0.8441	13448 Sec1 0.841	269863 PepO 0.8389

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	77.0386	1.50E-16	550 - 630	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	77.0386	1.50E-16	550 - 630	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_49425	PHATRDRAFT_49425	277285	322849	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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