260965 ABC_ATPaseThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260965	chr_1	ABC_ATPase	1620634	1622860	+	ABC_ATPase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445141	Thaps260965.3, Thaps260965.2, Thaps260965.4, Thaps260965.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0040	0.39	0.032 0.41

Most Highly Correlated Transcripts

32139 hypothetical protein 0.9174	13448 Sec1 0.9168	261400 NA 0.9134	16961 S_TKc 0.912	1687 hypothetical protein 0.9119	261894 (Tp_Myb4R2) MYB DNA binding protein/ transcription factor-like protein 0.9093
34594 (UNG) UDG_F1 0.9047	3500 hypothetical protein 0.9046	21434 AAA_26 0.9041	3310 hypothetical protein 0.9033

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase		Predicted ATPase of the ABC class; Members of this family include various bacterial predicted ABC...	-	552.203	0	84 - 541	multi-dom	255582

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43550	PHATRDRAFT_43550	157197	321049	452040	Not available	Not available	259448

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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