261102 PLN00049
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261102 chr_1 PLN00049 2436392 2437941 - PLN00049

Synonyms

NCBI ID Ensembl Genomes exon ID
7445015 Thaps261102.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Most Highly Correlated Transcripts

bd208

(bd208) DUF3529
0.9425

bd1306

(bd1306) NA
0.9413

6028

NA
0.9338

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9229

bd1645

(bd1645) tpt
0.918

24525

hypothetical protein
0.9147

bd258

(bd258) HU
0.9129

bd1820

(bd1820) Fasciclin
0.9125

bd1380

(bd1380) ycf39
0.9099

4516

hypothetical protein
0.9093

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_S41_CPP C-terminal processing peptidase; serine protease family S41; The C-terminal processing peptidase (... cl02526 215.739 1.47E-66 313 - 476 specific 143476
Peptidase_S41 superfamily C-terminal processing peptidase family S41; Peptidase family S41 (C-terminal processing peptidase... - 215.739 1.47E-66 313 - 476 superfamily 261325
PLN00049 carboxyl-terminal processing protease; Provisional - 265.832 2.90E-83 126 - 487 multi-dom 177681

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3061 PHATRDRAFT_3061 158338 219147 Not available Cre10.g420550.t1.1 AT5G46390.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0006508 GO:0008236 GO:0019132 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008236

serine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0019132

NA

Details: 
NA
GO Category: 
NA

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