263219 MFS_1Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263219	chr_7	MFS_1	1250701	1252458	-	MFS_1

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450661	Thaps263219.1, Thaps263219.3, Thaps263219.2, Thaps263219.5, Thaps263219.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0172

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0136	0.28	27 1100

Most Highly Correlated Transcripts

21168 hypothetical protein 0.9149	5038 DUF179 0.9148	10963 hypothetical protein 0.91	6693 hypothetical protein 0.9098	4502 hypothetical protein 0.9055	8784 hypothetical protein 0.9052
26769 ERG4_ERG24 superfamily 0.9052	263006 P4Hc 0.9047	21434 AAA_26 0.9017	11187 hypothetical protein 0.9001

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	61.9461	8.87E-11	105 - 489	superfamily	119392
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	61.9461	8.87E-11	105 - 489	superfamily	119392
MFS_1		Major Facilitator Superfamily; Major Facilitator Superfamily.	-	63.2076	3.33E-11	105 - 454	multi-dom	254360

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_16421	PHATRDRAFT_16421	226048	212052	52888	Cre16.g695500.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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