263707 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263707 chr_10 Mito_carr 843894 845078 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7446903 Thaps263707.2, Thaps263707.3, Thaps263707.4, Thaps263707.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0042

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0088
 0.37

Most Highly Correlated Transcripts

22725

hypothetical protein
0.8769

bd1828

(bd1828) NA
0.8571

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.8395

22879

hypothetical protein
0.8299

27873

PLN02274
0.8292

20626

hypothetical protein
0.8285

bd1876

(bd1876) NatB_MDM20 superfamily
0.8264

bd1945

(bd1945) NA
0.8224

270286

hypothetical protein
0.8161

31037

DEADc
0.8159

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 59.9555 8.22E-12 110 - 181 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_5175 PHATR_5175 213065 226837 436353 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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