269504 (ACT4) ACTIN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269504 chr_10 (ACT4) ACTIN 510174 512007 - ACTIN

Synonyms

NCBI ID Ensembl Genomes exon ID
7445884 Thaps269504.4, Thaps269504.2, Thaps269504.3, Thaps269504.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0127

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9186

40200

TRX_reduct
0.9176

24525

hypothetical protein
0.9132

30701

PRK05279
0.9116

37497

cysE
0.9047

41780

S_TKc
0.9017

31069

S_TKc
0.9004

4524

DHQS
0.8995

268358

hypothetical protein
0.8989

13448

Sec1
0.8979

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NBD_sugar-kinase_HSP70_actin Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... cl17037 62.9915 6.23E-12 25 - 200 specific 212657
NBD_sugar-kinase_HSP70_actin superfamily Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... - 62.9915 6.23E-12 25 - 200 superfamily 266502
ACTIN Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily - 446.319 1.42E-155 22 - 389 multi-dom 214592

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44089 PHATRDRAFT_44089 228346 239296 Not available Not available Not available 259446

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0005515 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

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